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Öğe An Accurate Multiple Sclerosis Detection Model Based on Exemplar Multiple Parameters Local Phase Quantization: ExMPLPQ(Mdpi, 2022) Macin, Gulay; Tasci, Burak; Tasci, Irem; Faust, Oliver; Barua, Prabal Datta; Dogan, Sengul; Tuncer, TurkerMultiple sclerosis (MS) is a chronic demyelinating condition characterized by plaques in the white matter of the central nervous system that can be detected using magnetic resonance imaging (MRI). Many deep learning models for automated MS detection based on MRI have been presented in the literature. We developed a computationally lightweight machine learning model for MS diagnosis using a novel handcrafted feature engineering approach. The study dataset comprised axial and sagittal brain MRI images that were prospectively acquired from 72 MS and 59 healthy subjects who attended the Ozal University Medical Faculty in 2021. The dataset was divided into three study subsets: axial images only (n = 1652), sagittal images only (n = 1775), and combined axial and sagittal images (n = 3427) of both MS and healthy classes. All images were resized to 224 x 224. Subsequently, the features were generated with a fixed-size patch-based (exemplar) feature extraction model based on local phase quantization (LPQ) with three-parameter settings. The resulting exemplar multiple parameters LPQ (ExMPLPQ) features were concatenated to form a large final feature vector. The top discriminative features were selected using iterative neighborhood component analysis (INCA). Finally, a k-nearest neighbor (kNN) algorithm, Fine kNN, was deployed to perform binary classification of the brain images into MS vs. healthy classes. The ExMPLPQ-based model attained 98.37%, 97.75%, and 98.22% binary classification accuracy rates for axial, sagittal, and hybrid datasets, respectively, using Fine kNN with 10-fold cross-validation. Furthermore, our model outperformed 19 established pre-trained deep learning models that were trained and tested with the same data. Unlike deep models, the ExMPLPQ-based model is computationally lightweight yet highly accurate. It has the potential to be implemented as an automated diagnostic tool to screen brain MRIs for white matter lesions in suspected MS patients.Öğe A chaotic optimization method based on logistic-sine map for numerical function optimization(Springer London Ltd, 2020) Demir, Fahrettin Burak; Tuncer, Turker; Kocamaz, Adnan FatihMeta-heuristic optimization algorithms have been used to solve mathematically unidentifiable problems. The main purpose of the optimization methods on problem-solving is to choose the best solution in predefined conditions. To increase performance of the optimization methods, chaotic maps for instance Logistic, Singer, Sine, Tent, Chebyshev, Circle have been widely used in the literature. However, hybrid 1D chaotic maps have higher performance than the 1D chaotic maps. The hybrid chaotic maps have not been used in the optimization process. In this article, 1D hybrid chaotic map (logistic-sine map)-based novel swarm optimization method is proposed to achieve higher numerical results than other optimization methods. Logistic-sine map has good statistical result, and this advantage is used directly to calculate global optimum value in this study. The proposed algorithm is a swarm-based optimization algorithm, and the seed value of the logistic-sine map is generated from local best solutions to reach global optimum. In order to test the proposed hybrid chaotic map-based optimization method, widely used numerical benchmark functions are chosen. The proposed chaotic optimization method is also tested on compression spring design problem. Results and comparisons clearly show that the proposed chaotic optimization method is successful.Öğe Exemplar deep and hand-modeled features based automated and accurate cerebral hemorrhage classification method(Elsevier Sci Ltd, 2022) Din, M. Sait; Gurbuz, Sukru; Akbal, Erhan; Dogan, Sengul; Durak, M. Akif; Yildirim, I. Okan; Tuncer, TurkerBackground: : Cerebral hemorrhage (CH) is a commonly seen disease, and an accurate diagnosis of the type of CH is a very crucial step in treatment. Therefore, CH requires a prompt and accurate diagnosis. To simplify this process, an accurate CH classification model is presented using a machine learning technique. Material and method: : A computed tomography (CT) image dataset was collected retrospectively in this research. This dataset contains 9818 images with five categories. An exemplar fused feature generator is presented to classify these features. This generator uses pre-trained AlexNet, local binary pattern (LBP), and local phase quantization (LPQ). The neighborhood component analysis (NCA) method selects the top features, and the chosen feature vector is classified on the support vector machine. Results: : Six validation methods are utilized to calculate the performance of the presented exemplar fused features and NCA-based CH classification model. This model attained 97.47%, 96.05%, 95.21%, 93.62%, 91.28% and 96.34% accuracies using five hold-out validations and ten-fold cross-validation respectively. Conclusions: : The calculated results clearly demonstrate the success and robustness of the introduced exemplar fused feature generation and NCA-based model. Furthermore, this model can be used in emergency services to overcome a prompt diagnosis of CH.Öğe Logistics-Singer Map-Based A New Chaotic Sara Optimization Method(Ieee, 2019) Demir, Fahrettin Burak; Tuncer, Turker; Kocamaz, Adnan FatihMany problems in daily life cannot be solved by using classical mathematical methods for having an infinite solution space. Therefore, it is recommended to use meta heuristic optimization methods that reduce the infinite solution space and based on the mathematical prediction principle in solving similar problems. In order to increase the performance of meta-heuristic optimization methods, number generator and chaotic maps are used. In this article, a new method of chaotic optimization has been developed and logistic and singer maps are used in the proposed optimization method. In order to test the performance of the proposed method, 6 different benchmarking functions and 3 different swarm-based optimization methods were used. The proposed method has produced more optimum results for all functions. In this way, it has been tried to prevent the integration of swarm optimization methods into local solutions.Öğe A survival classification method for hepatocellular carcinoma patients with chaotic Darcy optimization method based feature selection(Elsevier, 2020) Demir, Fahrettin Burak; Tuncer, Turker; Kocamaz, Adnan Fatih; Ertam, FatihSurvey is one of the crucial data retrieval methods in the literature. However, surveys often contain missing data and redundant features. Therefore, missing feature completion and feature selection have been widely used for knowledge extraction from surveys. We have a hypothesis to solve these two problems. To implement our hypothesis, a classification method is presented. Our proposed method consists of missing feature completion with a statistical moment (average) and feature selection using a novel swarm optimization method. Firstly, an average based supervised feature completion method is applied to Hepatocellular Carcinoma survey (HCC). The used HCC survey consists of 49 features. To select meaningful features, a chaotic Darcy optimization based feature selection method is presented and this method selects 31 most discriminative features of the completed HCC dataset. 0.9879 accuracy rate was obtained by using the proposed chaotic Darcy optimization-based HCC survival classification method.Öğe Swin-PHOG-LPQ: An accurate computed tomography images classification model using Swin architecture with handcrafted features(Elsevier Sci Ltd, 2023) Kaya, Davut; Gurbuz, Sukru; Yildirim, Okan; Akbal, Erhan; Dogan, Sengul; Tuncer, TurkerBackground and aim: Computed tomography (CT) image classification has been the subject of intense research in the area of biomedical image classification with the objective of developing intelligent disorder detection models. In this paper, we aim to detect three disorders in lung CT images: hemothorax, contusion, and pneumothorax. Deep learning models are particularly effective for computer vision tasks. Thus our second goal is to propose a new hand-modeled image classification model that achieves high performance using the shifted windows (swin) architecture.Materials and Methods: We collected a new lung CT image dataset containing four classes - hemothorax, contusion, pneumothorax, and control - with 2730 CT images. Our proposed swin architecture-based CT image classification model is designed to extract features from patches using the Pyramidal histogram-oriented gradient (PHOG) and local phase quantization (LPQ) methods for directional and textural features. We utilized an iterative neighborhood component analysis (INCA) feature selector for feature selection and classified the chosen features using the k-nearest neighbors (kNN) classifier with 10-fold cross-validation. Finally, majority voting was employed to obtain the final classification.Results: Our proposed Swin-PHOG-LPQ achieved a classification accuracy of 95.53%. We also evaluated our model on two publicly available CT image datasets and achieved classification accuracies of 95.31% and 97.63%, respectively.Conclusion: The high classification accuracies obtained by our proposed Swin-PHOG-LPQ model demonstrate its efficacy in detecting the three disorders in lung CT images.