Genetic relatedness in prunus genus revealed by inter-simple sequence repeat markers

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dc.authorscopusid35239424900
dc.authorscopusid23392282200
dc.authorscopusid8653465100
dc.authorscopusid24474086200
dc.authorscopusid6603328927
dc.contributor.authorYilmaz K.U.
dc.contributor.authorErcişli S.
dc.contributor.authorAsma B.M.
dc.contributor.authorDo?an Y.
dc.contributor.authorKafkas S.
dc.date.accessioned2024-08-04T19:59:07Z
dc.date.available2024-08-04T19:59:07Z
dc.date.issued2009
dc.departmentİnönü Üniversitesien_US
dc.description.abstractInter-simple sequence repeat (ISSR) markers were used to study the genetic diversity and phylogenetic relationships among 16 genotypes from subgenus Prunus (six genotypes from section Prunophora, seven genotypes from section Armeniaca and two plumcot genotypes, and one genotype from subgenus Cerasus) in Prunus genus. From the polymerase chain reaction amplifications with 20 ISSR primers showing polymorphism among subgenera and sections, 180 polymorphic ISSR bands were detected and polymorphism ratio ranged from 57% to 100%. Based on the unweighted pair group method with arithmetic mean (UPGMA) analysis and principal coordinate analysis (PCoA) using the Jaccard coefficient, a dendrogram and three-dimensional plot were constructed including genotypes in Prunus genus. Two main groups formed in the dendrogram; one of them (Cluster I) included Cerasus, whereas Cluster II included Prunus. Cluster II also divided into three subgroups, including sections Prunophora, Armeniaca, and plumcot. Both UPGMA and the PCoA demonstrated that Armeniaca genotypes had lower genetic variation and plumcot genotypes are closer to the plums than the apricots. The ISSR-based phylogeny was generally consistent with Prunus taxonomy based on molecular evidence, suggesting the applicability of ISSR analysis for genotypic and phylogenetic studies in Prunus genus.en_US
dc.identifier.doi10.21273/hortsci.44.2.293
dc.identifier.endpage297en_US
dc.identifier.issn0018-5345
dc.identifier.issue2en_US
dc.identifier.scopus2-s2.0-67049143967en_US
dc.identifier.scopusqualityQ2en_US
dc.identifier.startpage293en_US
dc.identifier.urihttps://doi.org/10.21273/hortsci.44.2.293
dc.identifier.urihttps://hdl.handle.net/11616/90400
dc.identifier.volume44en_US
dc.indekslendigikaynakScopusen_US
dc.language.isoenen_US
dc.publisherAmerican Society for Horticultural Scienceen_US
dc.relation.ispartofHortScienceen_US
dc.relation.publicationcategoryMakale - Uluslararası Hakemli Dergi - Kurum Öğretim Elemanıen_US
dc.rightsinfo:eu-repo/semantics/openAccessen_US
dc.subjectArmeniacaen_US
dc.subjectPrunophoraen_US
dc.subjectPrunusen_US
dc.subjectPrunus armeniacaen_US
dc.subjectPrunus domesticaen_US
dc.titleGenetic relatedness in prunus genus revealed by inter-simple sequence repeat markersen_US
dc.typeArticleen_US

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