S_allele identification and genetic diversity analysis of apricot cultivars

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dc.authoridTopçu, Hayat/0000-0003-3108-4393
dc.authoridKAFKAS, Salih/0000-0002-9037-4764
dc.authorwosidKafkas, Salih/AAG-9045-2020
dc.authorwosidMurathan, Zehra Tuğba/AAH-4553-2019
dc.authorwosidTopçu, Hayat/AAB-6545-2022
dc.authorwosidASMA, Bayram Murat/AAA-5009-2020
dc.authorwosidKAFKAS, Salih/J-4603-2018
dc.contributor.authorMurathan, Zehra Tugba
dc.contributor.authorKafkas, Salih
dc.contributor.authorAsma, Bayram Murat
dc.contributor.authorTopcu, Hayat
dc.date.accessioned2024-08-04T20:42:55Z
dc.date.available2024-08-04T20:42:55Z
dc.date.issued2017
dc.departmentİnönü Üniversitesien_US
dc.description.abstractIn this study, the sexual incompatibility and S-allele diversity of 24 Turkish apricot cultivars, Paviot and Sakt-1 as parents and 127 F-1 progenies were identified by polymerase chain reaction (PCR) and sequencing techniques. Additionally, genetic diversity and relatedness among the 24 cultivars were determined using 18 simple sequence repeat (SSR) markers from the genus Prunus. PCR for S_alleles identified nine different S-RNase alleles in the 24 apricot cultivars, namely S-c, S-1, S-2, S-8, S-9, S-20, S-24, S-52, and S-53. All primers amplified only one S_allele in the cultivars Adilcevaz-1, Adilcevaz-3, Ethembey, Pasamismisi, Canakkale, and Soganci. Most of the Turkish cultivars were self-incompatible. The S-c allele was present in only three cultivars (Canakkale, Ethembey, Imrahor) that are, therefore, self-compatible. The S_alleles of cultivars Paviot and Sakt-1 displayed homology with the S-c, S-2 and S-20, and S-52 alleles. In the 127 F-1 genotypes, the two S_alleles of Paviot were inherited by roughly half of the offspring, while about 76% of the offspring inherited the S-52 allele from Sakt-1, and less than 24% inherited S-20. The amplification using all SSR 18 primers was successful and produced 128 polymorphic alleles with an average of 7.11 alleles per locus. Among the apricot cultivars studied, expected heterozygosity (He) ranged from 0.33 to 0.72, observed heterozygosity (Ho) ranged from 0.42 to 1.00, PIC values were between 0.28 and 0.89, and similarity rates were between 0.30 and 0.68. The cultivars Levent and Ozal were genetically closest (0.68) while cultivars Sakt-3 and Soganc were the most distinct (0.30).en_US
dc.description.sponsorshipScientific and Technological Research Council of Turkey (TUBITAK) [113Z540]en_US
dc.description.sponsorshipThis work was funded by The Scientific and Technological Research Council of Turkey (TUBITAK) [grant number: 113Z540].en_US
dc.identifier.doi10.1080/14620316.2016.1255568
dc.identifier.endpage260en_US
dc.identifier.issn1462-0316
dc.identifier.issn2380-4084
dc.identifier.issue3en_US
dc.identifier.scopus2-s2.0-85010645156en_US
dc.identifier.scopusqualityQ2en_US
dc.identifier.startpage251en_US
dc.identifier.urihttps://doi.org/10.1080/14620316.2016.1255568
dc.identifier.urihttps://hdl.handle.net/11616/97675
dc.identifier.volume92en_US
dc.identifier.wosWOS:000399582800004en_US
dc.identifier.wosqualityQ2en_US
dc.indekslendigikaynakWeb of Scienceen_US
dc.indekslendigikaynakScopusen_US
dc.language.isoenen_US
dc.publisherTaylor & Francis Ltden_US
dc.relation.ispartofJournal of Horticultural Science & Biotechnologyen_US
dc.relation.publicationcategoryMakale - Uluslararası Hakemli Dergi - Kurum Öğretim Elemanıen_US
dc.rightsinfo:eu-repo/semantics/closedAccessen_US
dc.subjectGenetic diversityen_US
dc.subjectPCRen_US
dc.subjectPrunus armeniaca Len_US
dc.subjectSelf-incompatibilityen_US
dc.subjectSSRen_US
dc.titleS_allele identification and genetic diversity analysis of apricot cultivarsen_US
dc.typeArticleen_US

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